General information about HADDOCK can be found on our group page and its corresponding online manual. It will cover various steps, from the installation of a local HADDOCK2.4 version and the third party software required, the preparation of PDB files for docking, the definition of restraints to guide the docking, the setup of the docking and finally the analysis of the results. This tutorial will demonstrate the use of a local installation of HADDOCK2.4 for predicting the structure of biomolecular complexes. Comparison with the crystal structure of this antibody-antigen complex.Changing the number of models to be generated.Defining the protonation state of Histidines. ![]() Defining AIRs from interface mapping on one side, full surface on the other. ![]() This tutorial consists of the following sections:
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